{
  "_id": "6a1036d9acfb0bcc41c9a2c8",
  "Package": "imabc",
  "Type": "Package",
  "Title": "Incremental Mixture Approximate Bayesian Computation (IMABC)",
  "Version": "1.0.3",
  "Authors@R": "c(\nperson(\ngiven = \"Carolyn\",\nfamily = \"Rutter\",\nrole = c(\"aut\", \"cph\"),\nemail = \"crutter@fredhutch.org\",\ncomment = c(ORCID = \"0000-0002-4396-8594\")\n),\nperson(\ngiven = \"Jonathan\",\nfamily = \"Ozik\",\nrole = c(\"aut\"),\nemail = \"jozik@anl.gov\",\ncomment = c(ORCID = \"0000-0002-3495-6735\")\n),\nperson(\ngiven = \"Nicholson\",\nfamily = \"Collier\",\nrole = c(\"aut\"),\nemail = \"ncollier@anl.gov\",\ncomment = c(ORCID = \"0000-0002-2376-4156\")\n),\nperson(\ngiven = \"Christopher, E.\",\nfamily = \"Maerzluft\",\nrole = c(\"aut\", \"cre\"),\nemail = \"cmaerzlu@fredhutch.org\"\n)\n)",
  "Description": "Provides functionality to perform a likelihood-free method\nfor estimating the parameters of complex models that results in\na simulated sample from the posterior distribution of model\nparameters given targets. The method begins with a\naccept/reject approximate bayes computation (ABC) step applied\nto a sample of points from the prior distribution of model\nparameters. Accepted points result in model predictions that\nare within the initially specified tolerance intervals around\nthe target points. The sample is iteratively updated by drawing\nadditional points from a mixture of multivariate normal\ndistributions, accepting points within tolerance intervals. As\nthe algorithm proceeds, the acceptance intervals are narrowed.\nThe algorithm returns a set of points and sampling weights that\naccount for the adaptive sampling scheme. For more details see\nRutter, Ozik, DeYoreo, and Collier (2018) <arXiv:1804.02090>.",
  "License": "GPL-3",
  "URL": "https://github.com/c-rutter/imabc",
  "BugReports": "https://github.com/c-rutter/imabc/issues",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.2.1",
  "VignetteBuilder": "knitr",
  "Repository": "https://c-rutter.r-universe.dev",
  "Date/Publication": "2023-03-21 18:58:24 UTC",
  "RemoteUrl": "https://github.com/c-rutter/imabc",
  "RemoteRef": "HEAD",
  "RemoteSha": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-12 06:38:28 UTC",
    "User": "root"
  },
  "Author": "Carolyn Rutter [aut, cph] (ORCID:\n<https://orcid.org/0000-0002-4396-8594>),\nJonathan Ozik [aut] (ORCID: <https://orcid.org/0000-0002-3495-6735>),\nNicholson Collier [aut] (ORCID:\n<https://orcid.org/0000-0002-2376-4156>),\nChristopher, E. Maerzluft [aut, cre]",
  "Maintainer": "\"Christopher, E. Maerzluft\" <cmaerzlu@fredhutch.org>",
  "MD5sum": "a54c70bb7f5d42510a2777a438570387",
  "_user": "c-rutter",
  "_type": "src",
  "_file": "imabc_1.0.3.tar.gz",
  "_fileid": "55ac305c137122848014ed1430a43a8f201e729bdddb6b1775b8a3761cb35668",
  "_filesize": 251149,
  "_sha256": "55ac305c137122848014ed1430a43a8f201e729bdddb6b1775b8a3761cb35668",
  "_created": "2026-05-12T06:38:28.000Z",
  "_published": "2026-05-22T10:58:33.303Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77366104258,
      "time": 117,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6937361451"
    },
    {
      "job": 77366104227,
      "time": 110,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6937361231"
    },
    {
      "job": 77366104543,
      "time": 135,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6937360912"
    },
    {
      "job": 77366104118,
      "time": 172,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6937366730"
    },
    {
      "job": 77366103936,
      "time": 162,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6937332239"
    },
    {
      "job": 77366103786,
      "time": 110,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7158863630"
    },
    {
      "job": 77366104609,
      "time": 80,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6937352090"
    },
    {
      "job": 77366104761,
      "time": 112,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6937360044"
    },
    {
      "job": 77366104067,
      "time": 71,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6937349728"
    }
  ],
  "_buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/c-rutter/imabc",
  "_commit": {
    "id": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
    "author": "cmaerzluft <chrismaerzluft@gmail.com>",
    "committer": "cmaerzluft <chrismaerzluft@gmail.com>",
    "message": "knit new README\n",
    "time": 1679425104
  },
  "_maintainer": {
    "name": "\"Christopher, E. Maerzluft\"",
    "email": "cmaerzlu@fredhutch.org"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.2.0",
      "role": "Depends"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "data.table",
      "role": "Imports"
    },
    {
      "package": "foreach",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "truncnorm",
      "role": "Imports"
    },
    {
      "package": "lhs",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "c-rutter",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_topics": [
    "calibration",
    "simulation"
  ],
  "_stars": 9,
  "_contributors": [
    {
      "user": "cmaerzluft",
      "count": 19,
      "uuid": 9489362
    },
    {
      "user": "jozik",
      "count": 5,
      "uuid": 1263820
    },
    {
      "user": "carolyner",
      "count": 4,
      "uuid": 11634076
    },
    {
      "user": "feloundo",
      "count": 3,
      "uuid": 73682580
    }
  ],
  "_userbio": {
    "uuid": 90808058,
    "type": "organization",
    "name": "c-rutter"
  },
  "_downloads": {
    "count": 216,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/imabc"
  },
  "_devurl": "https://github.com/c-rutter/imabc",
  "_searchresults": 8,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/imabc.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/c-rutter/imabc",
  "_realowner": "c-rutter",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2021-04-12"
    }
  ],
  "_exports": [
    "add_prior",
    "add_target",
    "as.priors",
    "as.targets",
    "define_priors",
    "define_target_function",
    "define_targets",
    "group_targets",
    "imabc",
    "read_previous_results"
  ],
  "_help": [
    {
      "page": "define_target_function",
      "title": "Define Target Function(s)",
      "topics": [
        "define_target_function"
      ]
    },
    {
      "page": "imabc",
      "title": "Incremental Mixture Approximate Bayesian Computation (IMABC)",
      "topics": [
        "imabc"
      ]
    },
    {
      "page": "PriorsSpecification",
      "title": "Specify the Prior Distributions for All Parameters",
      "topics": [
        "add_prior",
        "as.priors",
        "define_priors",
        "PriorsSpecification"
      ]
    },
    {
      "page": "read_previous_results",
      "title": "Read Previous Results",
      "topics": [
        "read_previous_results"
      ]
    },
    {
      "page": "TargetsSpecifications",
      "title": "Specify Targets",
      "topics": [
        "add_target",
        "as.targets",
        "define_targets",
        "group_targets",
        "TargetsSpecifications"
      ]
    }
  ],
  "_pkglogo": "https://github.com/c-rutter/imabc/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/c-rutter/imabc/raw/HEAD/README.md",
  "_rundeps": [
    "codetools",
    "data.table",
    "foreach",
    "iterators",
    "lhs",
    "MASS",
    "Rcpp",
    "truncnorm"
  ],
  "_vignettes": [
    {
      "source": "priors.Rmd",
      "filename": "priors.html",
      "title": "Defining Priors",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Defining Prior Distributions"
      ],
      "created": "2022-11-09 23:25:49",
      "modified": "2022-11-09 23:25:49",
      "commits": 1
    },
    {
      "source": "imabc.Rmd",
      "filename": "imabc.html",
      "title": "imabc",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction to IMABC",
        "Step 1 - Define the priors",
        "Step 2 - Define target values",
        "Step 3 - Define the target function",
        "Step 4 - Calibrate the model"
      ],
      "created": "2022-11-09 23:25:49",
      "modified": "2022-11-10 07:04:22",
      "commits": 2
    }
  ],
  "_score": 5.431363764158988,
  "_indexed": true,
  "_nocasepkg": "imabc",
  "_universes": [
    "c-rutter"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-12T06:40:25.000Z",
      "distro": "noble",
      "commit": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
      "fileid": "7b8c2611a465ae1e7d5a1f7614314301dfcb6ebc3ed0a9f2d59038514d6e51b1",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-12T06:40:26.000Z",
      "distro": "noble",
      "commit": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
      "fileid": "f93d5a5f171412ab44a2ac820389bbe781e2a276c106ce6c839f6a8d5513351f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.3",
      "date": "2026-05-12T06:40:30.000Z",
      "commit": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
      "fileid": "486b0913ba55253132add5829f91c7689c56c39f5caf8aefafd84fcdb7c1cd78",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.3",
      "date": "2026-05-12T06:40:45.000Z",
      "commit": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
      "fileid": "3e149a2a910954ce1b8659063ffe3fb64736f460c3988774787ed5686a9c9ba5",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.3",
      "date": "2026-05-12T06:39:44.000Z",
      "commit": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
      "fileid": "e5e61a08638355dddffb2716e018fcacdf7fb46e5a63217fb1eefac856c28053",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.3",
      "date": "2026-05-12T06:40:14.000Z",
      "commit": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
      "fileid": "dad862cbea3c0b19c6068cfcffa074973b0fd538cccf02a2a3a60cd51080e92f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.3",
      "date": "2026-05-12T06:39:35.000Z",
      "commit": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
      "fileid": "4a2181b7710e23c40ae1dcbd3d8349b4ac2eeb70be2b00b3836f2f2c3ebfcfc9",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.3",
      "date": "2026-05-22T10:58:21.000Z",
      "commit": "a58a3b7c8db18948ff87fb6be55c6175399f41a2",
      "fileid": "489af3f2f57070df797bd294dee8a7a23869ac105c71764dacd89a8d65c48d55",
      "status": "success",
      "buildurl": "https://github.com/r-universe/c-rutter/actions/runs/25717828747"
    }
  ]
}